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User Manual.


This manual describes the functions of the LightSpectra app. It assumes you have already performed the basic operations described in the quick-start guide.



Introduction
Light sources can emit over a range of wavelengths depending on the materials that are being excited. 


Below is shown a schematic of a basic spectrometer using a transmission diffraction grating.


schematic
The light source produces light in all directions. The collimator will absorb all rays except the horizontal ones that travel through both slits. The light exiting the second slit will then travel through the diffraction grating where interference will cause the wavelengths to split.



Here is the spectrometer I used to generate the example spectrum that came preloaded with the app.

spectrometer1   spectrometer2
The collimator was made from a tube of lip balm with two narrow (<1mm) slits cut on either side. The inside was colored black with a marker. Over the slit on the cap, I taped a 360 lines/mm grating film. You can buy them online for about $1 plus shipping. One of the main reasons I used this tube is because it detaches into two parts. It makes it much easier to line up your slit with your camera. I put the small cap over top of the camera and made sure I could see multiple images through it, taped it on, then put the rest of the tube onto the cap.

There are many good designs you can find on the internet for home-made spectrometers. Some are designed such that all you will see on your camera are the first order diffracted images, no central line. These are preferable for higher resolution in the region of interest. The design I used will show the central line as well as the first order spectrum. I find this is preferable for image stability. You can use either type with this program. You just need to make sure you choose the appropriate calibration.



center1        center2
Spectra with center lines

nocenter
Spectrum with no center line



A number of designs available on the web will use part of an old CD as the diffraction grating. While it is possible to do this, I find the transmission film preferable mainly because the diffraction grating on the CD is curved which leads to curved spectra.

While the software is designed to compensate for some curvature when calculating the maximums, it can only do so much. Try to make the lines as straight as possible. So if you do use a CD for the grating, try to use the outer edge where it is the straightest. Then when you take your images, crop to a small region.

The better job you do on constructing the spectrometer, the better results you will have.



Getting an image
You have two options with this app, you can use the built in camera (paid version only), or you can use your favorite camera app, then load this image (as per the example in the quick-start guide).

You can load as many images as you want, they will be placed in their own tabs. [Multiple tabs available only in paid version]


Examining the image
There are some options for manipulating the image (in the main menu):
-Mirror horizontally: Unnecessary for spectra with central line. For no central line, make sure the lowest wavelength is the leftmost one.
 

-Crop to View: Use this for spectra with central lines. Do this after you zoom in to have spectrum centered. (The spectrum must be relatively centered in order for the program to find the maximums).

-Crop to Height: Use this for spectra with no central lines, otherwise your calibration will be thrown off.

-Show full spectrum: Just goes back to full view for this crop.

-Generate Report: After the lines are calibrated. This will create a pdf report of the current spectrum, listing values of each maximum, will attempt to open your default pdf reader. [Available only in paid version]

*Note, you can zoom in to your image as much as you want. But the calculations will be performed to the last cropped image.*


On the tab there are a number of buttons showing position of maximums, and total, red, green and blue intensities. When any of them are clicked the image will be automatically analyzed and the maximums will be calculated. You may notice that the maximum lines may not line up exactly with the peaks you see and there may not be one for each peak. This is because the total intensity displayed is from the spectrum across the central row. Whereas the distances of the maximum lines may be calculated from the average of a number of rows. It also depends on the smoothing and minimum intensity settings.

centralrow



Calibration
There are four calibration options and it is important to understand the difference between them.

The position of the spectrum and location on your screen depends on a number of factors:
-The distance of your spectrometer to your camera lens.
-The grating size in your spectrometer. The grating I used is ruled at 360 lines/mm, and I have set this to the parameters default value.
-The angle of your spectrometer to your camera (ideally it should be perpendicular, but the calibration accounts for any angle).

-Are you examining a spectrum with or without the center line?



In some detail:




Below is a table to summarize the calibrations required

System
Calibration Required
Central Line, Grating Known
2 Line Calibration With Center
Central Line, Grating unknown
3 Line Calibration With Center
No Central Line, Grating Known
3 Line Calibration No Center
No Central line, Grating unknown
4 Line Calibration No Center
In addition, you can set the grating size manually by choosing from the main menu "calibration->set grating size".


After calibration, you may save these values and load them again next time so you don't have to recalibrate. However, if you do this you must be careful to ensure the system hasn't changed.

The benefit of using the center line is that you can zoom in and crop your image to where you like (as long as the center line remains in the crop). The program  will automatically detect it for each image and all the rest of the lines will be measured relative to their center lines. In that way it is rather robust if your spectrometer gets moved a bit. The disadvantage of having the center line is that a lot of your image real-estate is filled with empty space. You will have a more limited resolution on the more interesting part of the spectrum.

When you don't have a center line, (directly from your spectrometer, not digitally zoomed in to remove the central line) you will see more detail and more peaks. Again, you can calibrate in this case too following the table above. However you have to be more careful with the system now. There is no center line for the program to automatically calibrate to. It will not use relative positions to the center. It requires all pictures used under this calibration to not have been cropped in the horizontal direction. In this case you can crop, but only in height. For that use the "crop to current height" option. Also, care must be taken to not move the
spectrometer or it will throw the calibration off. If you are confident that your spectrometer is secure, this would be the best option.

In the quick-start guide, the system was calibrated with two maximums. To calibrate with more maximums according to the above table, follow the same procedure, but now press the third and fourth buttons for those lines you wish to use. You also have the option to calibrate with respect to more than one image. Perhaps you have one image that has one line you want to use and another image that has the rest. The procedure is the same as the quick start. Just go to the tab of the image you want to use and select the line.

For convenience, some of the CFL lines and their wavelengths have been listed in the calibration lines box. You may add whatever lines you wish and also save them in the list. Either entering them during calibration or before by going to the option "Calibration->edit calibration lines". If you want to add a description of the line you are using to go with the value (in nm) follow the format of : <the number> space <description> as you see with the ones already added. If you choose to save them to the list, they will be available every time you start the program unless deleted.


Examining maximums.
After selecting the lines you want to calibrate against and choosing the appropriate calibration option. You can now touch on any maximum and a dialog will pop up showing you the wavelength of that line and some elements that emit within 0.5, 1 ,2 or 3 nm of that wavelength. You can also generate a pdf report of this spectrum by going "Image->generate report". [report function only in paid version]

The data for the elements emission wavelengths are extracted from the data sheets compiled by the National Insitute of Standards and Technology.


Settings
There are three settings that you can modify for image quality under the settings option. Each one of them gives you the option to change this value globally (which will automatically save it for each time you run the program) or you can select it to change it just for this tab. After changing the settings, the affected images will be updated to reflect these new values, and any calibration lines on them will be removed. Note however, that the curves for total and color intensities will be unaffected as they are plots derived from the raw data.

1. Smoothing
This will smooth the curve. This is meant to compensate for fluctuations in the camera. Some of the extra maximums will be removed. The higher the number chosen, the larger the smoothing.

2. Minimum Intensity
Intensities below the chosen value will be set to zero.

3. Range
The spectrum for each row on the image has a corresponding intensity curve and maximums. In order to help compensate for spurious fluctuations, the option is provided that the maximums found can be determined from the average of all or a subset of the rows. The software will also try to compensate if the spectrum lines are not completely vertical (it is a good idea however to take care in the construction of the spectrometer to make them as vertical as possible). If a maximum was only found on a few of the rows, but not present on the vast majority of them being considered, this maximum will be ignored.

If the value of 1 is chosen for the range, none of the averaging will take place. The row chosen will be the center row.

If you choose smoothing=0, minimum intensity =0, and range =1, there will be a very large number of maximum lines and they will correspond to all the maximums seen on total intensity curve.



Application Notes:
1. The camera has been tested on a Samsung Galaxy Tab 3 running Android 4.1.2 with no issues. It also ran well on stock Android 4.4. However, it crashed under Samsung's modified version of 4.4 for the Galaxy. At this point, while the matter is under investigation, consider the camera functionality experimental which may or may not work on your android version.

2. On some versions of android, LightSpectra will not switch properly if you:
         - switch apps,
         - then press home,
         - then press the app again.
To guarantee that the program switches back properly, please use an app switcher instead.



Camera Disclaimer
The camera part of this app is based on the QT example "declarative-camera" using QML. It is free to use provided the information below is attached in the documentation.

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License Disclaimer

LightSpectra and LightSpectraLITE are built using the open source version of Qt 5.3.1.
This version of Qt is distributed under the Lesser GNU public license reproduced below:


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